Publications
Bekal, S., Craig, J., Hudson, M., Niblack, T., Domier, L and Lambert, KN (2008). Genomic DNA sequence comparison between two inbred soybean cyst nematode biotypes facilitated by massively parallel 454 micro-bead sequencing. Mol Genet Genomics 279, 535-543.
Hudson, M (2008). Sequencing breakthroughs for genomic ecology and evolutionary biology. Molecular Ecology Resources 8, 3-17.
Toth, AL, Varala, K, Newman, TC, Miguez, FE, Hutchison, SK, Willoughby, DA, Simons, JF, Egholm, M, Hunt, JH, Hudson, M, and Robinson, GE (2007). Wasp Gene Expression Supports an Evolutionary Link Between Maternal Behavior and Eusociality. Science 318, 441-444.
Walley JW, Coughlan S, Hudson M, Covington MF, Kaspi R, Banu G, Harmer SL and Dehesh K (2007). Mechanical stress induces biotic and abiotic stress responses via a novel cis-element. PLOS Genetics 3:10
Hudson, M., Bruggink, T, Chang, S.H., Yu, W., Han. B., Wang, X., van der Toorn, P. and Zhu, T. (2007). Analysis of Gene Expression during Brassica Seed Germination Using a Cross-Species Microarray Platform. Plant Genome 2, S-96-S-117, Crop Science 47, 96-112.
Swaminathan, K.*, Varala, K.*, and Hudson, M (2007). Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey. BMC Genomics 8:132.
Hudson, M (2006). Photoreceptor Biotechnology. In: Light and Plant Development, G.C. Whitelam, ed., Blackwell, 2006.
Chen, WJ, Chang SH, Hudson M, Kwan WK, Li J, Estes B, Knoll D, Shi L and Zhu T (2005). Contribution of transcriptional regulation to natural variations in Arabidopsis. Genome Biology 6:R32.
Huq, E., Al-Sady, B., Hudson,M. , Kim, C., Apel, K and Quail, P.H. (2004). PHYTOCHROME-INTERACTING FACTOR 1 Is a Critical bHLH Regulator of Chlorophyll Biosynthesis. Science 305, 1937-1941.
Tepperman JM, Hudson M , Khanna R, Zhu T, Chang SH, Wang X, Quail PH. (2004). Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation. Plant J. 38, 725-739.
Hudson, M and Quail, P.H. (2003). Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data. Plant Physiol. 133, 1605-1616.
Hudson, M. , Lisch, D.R. and Quail, P.H. (2003). The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A signaling pathway. Plant J. 34, 453-471.
Anderson, A, Hudson, M. , Chen, W and Zhu, T. (2003). Identification of nutrient partitioning genes participating in rice grain filling by singular value decomposition (SVD) of genome expression data. BMC Genomics 4:26.
Hudson, M. (2000). The genetics of phytochrome signalling in Arabidopsis. Semin. Cell Dev. Biol. 11, 475-583.
Hudson, M*, Ringli, C*, Boylan, M.T. and Quail, P.H. (1999). The FAR1 locus encodes a novel nuclear protein specific to phytochrome A signaling. Genes Dev. 13, 2017-2027.
Halliday, K.J., Hudson, M. , Ni, M., Qin, M.-M. and Quail, P.H. (1999). poc1: An Arabidopsis mutant perturbed in phytochrome signaling because of a T DNA insertion in the promoter of PIF3, a gene encoding a phytochrome-interacting bHLH protein. Proc. Natl. Acad. Sci. USA 96, 5832-5837.
Hudson, M. and Smith, H. (1998). The phytochrome B encoded by the HLG locus of Nicotiana plumbaginifolia is required for detection of photoperiod: hlg mutants show altered regulation of flowering and circadian movement. Plant J. 15, 281-287.
Hudson, M. , Robson, P.R.H., Kraepiel, Y, Caboche, M. and Smith, H. (1997). Nicotiana plumbaginifolia hlg mutants have a mutation in a PHYB-type phytochrome gene: they have elongated hypocotyls in red light, but are not elongated as adult plants. Plant J. 12, 1091-1101.
bold indicates lab members
* equal contributors
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